Index A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | V | Z A AcceleratedIndexationGenerator (class in pyxem.generators) add_background_lorentz() (pyxem.dummy_data.DiffractionTestImage method) add_cubic_disks() (pyxem.dummy_data.DiffractionTestImage method) add_diffraction_image() (pyxem.dummy_data.DiffractionTestDataset method) add_disk() (pyxem.dummy_data.DiffractionTestImage method) (pyxem.dummy_data.MakeTestData method) add_disk_ellipse() (pyxem.dummy_data.MakeTestData method) add_ellipse_array_as_markers() (pyxem.signals.Diffraction2D method) add_navigation_signal() (pyxem.signals.CommonDiffraction method) add_peak_array_as_markers() (pyxem.signals.Diffraction2D method) add_ring() (pyxem.dummy_data.MakeTestData method) add_ring_ellipse() (pyxem.dummy_data.MakeTestData method) ai (pyxem.signals.Diffraction2D property) angular_mask() (pyxem.signals.Diffraction2D method) angular_slice_radial_average() (pyxem.signals.Diffraction2D method) angular_slice_radial_integration() (pyxem.signals.Diffraction2D method) apply_affine_transformation() (pyxem.signals.Diffraction2D method) apply_gain_normalisation() (pyxem.signals.Diffraction2D method) au_grating() (in module pyxem.data) B beam_energy (pyxem.signals.ElectronDiffraction2D property) BeamShift (class in pyxem.signals) blur() (pyxem.dummy_data.MakeTestData method) C calc_mask() (pyxem.detectors.Medipix515x515Detector method) calculate_cartesian_coordinates() (pyxem.signals.DiffractionVectors method) CalibrationDataLibrary (class in pyxem.libraries) CalibrationGenerator (class in pyxem.generators) camera_length (pyxem.signals.ElectronDiffraction2D property) center (pyxem.signals.DiffractionVectors property) center_direct_beam() (pyxem.signals.Diffraction2D method) center_of_mass() (pyxem.signals.Diffraction2D method) center_of_mass_method() (pyxem.generators.SubpixelrefinementGenerator method) centre_on_image() (pyxem.dummy_data.Circle method) Circle (class in pyxem.dummy_data) cluster() (pyxem.signals.DiffractionVectors method) cluster_labeled_vectors() (pyxem.signals.LabeledDiffractionVectors2D method) column_names (pyxem.signals.DiffractionVectors property) CommonDiffraction (class in pyxem.signals) conventional_xc() (pyxem.generators.SubpixelrefinementGenerator method) copy() (pyxem.dummy_data.DiffractionTestImage method) correct_bad_pixels() (pyxem.signals.Diffraction2D method) correct_ramp() (pyxem.signals.DPCSignal2D method) correct_real_space_drift() (pyxem.signals.InSituDiffraction2D method) correct_real_space_drift_fast() (pyxem.signals.InSituDiffraction2D method) correlate() (pyxem.generators.AcceleratedIndexationGenerator method) correlate_learning_segments() (pyxem.signals.LearningSegment method) correlate_vdf_segments() (pyxem.signals.VDFSegment method) Correlation1D (class in pyxem.signals) Correlation2D (class in pyxem.signals) D damp_exponential() (pyxem.signals.ReducedIntensity1D method) damp_extrapolate_to_zero() (pyxem.signals.ReducedIntensity1D method) damp_lorch() (pyxem.signals.ReducedIntensity1D method) damp_low_q_region_erfc() (pyxem.signals.ReducedIntensity1D method) damp_updated_lorch() (pyxem.signals.ReducedIntensity1D method) detector_shape (pyxem.signals.DiffractionVectors property) determine_ellipse() (in module pyxem.utils) Diffraction1D (class in pyxem.signals) Diffraction2D (class in pyxem.signals) diffraction_calibration (pyxem.signals.ElectronDiffraction2D property) DiffractionTestDataset (class in pyxem.dummy_data) DiffractionTestImage (class in pyxem.dummy_data) DiffractionVariance1D (class in pyxem.signals) DiffractionVariance2D (class in pyxem.signals) DiffractionVectors (class in pyxem.signals) DiffractionVectors1D (class in pyxem.signals) DiffractionVectors2D (class in pyxem.signals) Disk (class in pyxem.dummy_data) DisplacementGradientMap (class in pyxem.signals) downscale() (pyxem.dummy_data.MakeTestData method) DPCBaseSignal (class in pyxem.signals) DPCSignal1D (class in pyxem.signals) DPCSignal2D (class in pyxem.signals) E ElectronDiffraction1D (class in pyxem.signals) ElectronDiffraction2D (class in pyxem.signals) EllipseDisk (class in pyxem.dummy_data) EllipseRing (class in pyxem.dummy_data) extract_intensities() (pyxem.generators.IntegrationGenerator method) extract_intensities_summation_method() (pyxem.generators.IntegrationGenerator method) F filter() (pyxem.signals.Diffraction2D method) filter_basis() (pyxem.signals.DiffractionVectors method) filter_detector_edge() (pyxem.signals.DiffractionVectors method) (pyxem.signals.DiffractionVectors2D method) filter_magnitude() (pyxem.signals.DiffractionVectors method) (pyxem.signals.DiffractionVectors2D method) find_dead_pixels() (pyxem.signals.Diffraction2D method) find_diffraction_calibration() (in module pyxem.utils) find_hot_pixels() (pyxem.signals.Diffraction2D method) find_peaks_lazy() (pyxem.signals.Diffraction2D method) fit_atomic_scattering() (pyxem.generators.ReducedIntensityGenerator1D method) fit_thermal_multiple_scattering_correction() (pyxem.signals.ReducedIntensity1D method) flatten_diffraction_vectors() (pyxem.signals.DiffractionVectors method) flip_axis_90_degrees() (pyxem.signals.DPCSignal2D method) flip_diffraction_x() (pyxem.signals.Diffraction2D method) flip_diffraction_y() (pyxem.signals.Diffraction2D method) from_peaks() (pyxem.signals.DiffractionVectors class method) (pyxem.signals.DiffractionVectors2D method) function() (pyxem.components.ReducedIntensityCorrectionComponent method) (pyxem.components.ScatteringFitComponentLobato method) (pyxem.components.ScatteringFitComponentXTables method) G gaussian_blur() (pyxem.signals.DPCSignal2D method) generate_4d_data() (in module pyxem.dummy_data) generate_mesh() (pyxem.dummy_data.MakeTestData method) GenericFlatDetector (class in pyxem.detectors) get_angles() (pyxem.signals.PolarVectors method) get_angular_correlation() (pyxem.signals.PolarDiffraction2D method) get_angular_power() (pyxem.signals.Correlation2D method) (pyxem.signals.PolarDiffraction2D method) get_azimuthal_integral1d() (pyxem.signals.Diffraction2D method) get_azimuthal_integral2d() (pyxem.signals.Diffraction2D method) get_bivariate_histogram() (pyxem.signals.DPCSignal1D method) (pyxem.signals.DPCSignal2D method) get_cbed_signal() (in module pyxem.dummy_data) get_centre_pixel() (pyxem.dummy_data.Circle method) get_color_image_with_indicator() (pyxem.signals.DPCSignal2D method) get_color_signal() (pyxem.signals.DPCSignal2D method) get_concentric_virtual_images() (pyxem.generators.VirtualImageGenerator method) get_correction_matrix() (pyxem.generators.CalibrationGenerator method) get_crystallographic_map() (pyxem.signals.VectorMatchingResults method) get_dead_pixel_signal() (in module pyxem.dummy_data) get_diffracting_pixels_map() (pyxem.signals.DiffractionVectors method) get_diffraction_calibration() (pyxem.generators.CalibrationGenerator method) get_diffraction_test_image() (pyxem.dummy_data.DiffractionTestImage method) get_diffraction_variance() (pyxem.generators.VarianceGenerator method) get_direct_beam_mask() (pyxem.signals.Diffraction2D method) get_direct_beam_position() (pyxem.signals.Diffraction2D method) get_disk_shift_simple_test_signal() (in module pyxem.dummy_data) get_DisplacementGradientMap() (in module pyxem.generators) get_distortion_residuals() (pyxem.generators.CalibrationGenerator method) get_drift_vectors() (pyxem.signals.InSituDiffraction2D method) get_elliptical_distortion() (pyxem.generators.CalibrationGenerator method) get_fem_signal() (in module pyxem.dummy_data) get_full_pearson_correlation() (pyxem.signals.PolarDiffraction2D method) get_g2_2d_kresolved() (pyxem.signals.InSituDiffraction2D method) get_generic_fem_signal() (in module pyxem.dummy_data) get_holz_heterostructure_test_signal() (in module pyxem.dummy_data) get_holz_simple_test_signal() (in module pyxem.dummy_data) get_hot_pixel_signal() (in module pyxem.dummy_data) get_image_variance() (pyxem.generators.VarianceGenerator method) get_indexed_diffraction_vectors() (pyxem.signals.VectorMatchingResults method) get_integrated_intensity() (pyxem.signals.CommonDiffraction method) get_magnitude_histogram() (pyxem.signals.DiffractionVectors method) get_magnitude_signal() (pyxem.signals.DPCSignal2D method) get_magnitudes() (pyxem.signals.DiffractionVectors method) (pyxem.signals.DiffractionVectors2D method) get_map() (pyxem.signals.Power2D method) get_medfilt1d() (pyxem.signals.Diffraction2D method) get_nanobeam_electron_diffraction_signal() (in module pyxem.dummy_data) get_navigation_calibration() (pyxem.generators.CalibrationGenerator method) get_ncc_matrix() (pyxem.signals.LearningSegment method) (pyxem.signals.VDFSegment method) get_pdf() (pyxem.generators.PDFGenerator1D method) get_pearson_correlation() (pyxem.signals.PolarDiffraction2D method) get_phase_signal() (pyxem.signals.DPCSignal2D method) get_radial_integral() (pyxem.signals.Diffraction2D method) get_reduced_intensity() (pyxem.generators.ReducedIntensityGenerator1D method) get_resolved_pearson_correlation() (pyxem.signals.PolarDiffraction2D method) get_rotation_calibration() (pyxem.generators.CalibrationGenerator method) get_signal() (pyxem.dummy_data.DiffractionTestDataset method) (pyxem.dummy_data.DiffractionTestImage method) (pyxem.dummy_data.Disk method) (pyxem.dummy_data.EllipseDisk method), [1] (pyxem.dummy_data.EllipseRing method), [1] (pyxem.dummy_data.Ring method) get_simple_dpc_signal() (in module pyxem.dummy_data) get_simple_ellipse_signal_peak_array() (in module pyxem.dummy_data) get_simple_fem_signal() (in module pyxem.dummy_data) get_single_DisplacementGradientTensor() (in module pyxem.generators) get_single_ring_diffraction_signal() (in module pyxem.dummy_data) get_square_dpc_signal() (in module pyxem.dummy_data) get_strain_maps() (pyxem.signals.DisplacementGradientMap method) get_stripe_pattern_dpc_signal() (in module pyxem.dummy_data) get_summed_angular_power() (pyxem.signals.Correlation2D method) get_symmetry_coefficient() (pyxem.signals.Correlation1D method) (pyxem.signals.Correlation2D method) get_time_series() (pyxem.signals.InSituDiffraction2D method) get_unique_vectors() (pyxem.signals.DiffractionVectors method) (pyxem.signals.DiffractionVectors2D method) get_variance() (pyxem.signals.Diffraction2D method) get_vdf_segments() (pyxem.signals.VirtualDarkFieldImage method) get_virtual_dark_field_images() (pyxem.generators.VirtualDarkFieldGenerator method) get_virtual_electron_diffraction() (pyxem.signals.VDFSegment method) get_virtual_images_from_mesh() (pyxem.generators.VirtualImageGenerator method) H has_delta_phi (pyxem.signals.PolarVectors property) has_navigation_axis (pyxem.signals.DiffractionVectors property) (pyxem.signals.DiffractionVectors2D property) I ImageVariance (class in pyxem.signals) index_peaks() (pyxem.generators.ProfileIndexationGenerator method) index_vectors() (pyxem.generators.VectorIndexationGenerator method) IndexationGenerator (class in pyxem.generators) InSituDiffraction2D (class in pyxem.signals) IntegrationGenerator (class in pyxem.generators) intensity_peaks() (pyxem.signals.Diffraction2D method) is_clustered (pyxem.signals.LabeledDiffractionVectors2D property) L LabeledDiffractionVectors2D (class in pyxem.signals) LazyBeamShift (class in pyxem.signals) LazyCorrelation1D (class in pyxem.signals) LazyCorrelation2D (class in pyxem.signals) LazyDPCBaseSignal (class in pyxem.signals) LazyDPCSignal1D (class in pyxem.signals) LazyDPCSignal2D (class in pyxem.signals) LazyPolarVectors (class in pyxem.signals) LearningSegment (class in pyxem.signals) local_gaussian_method() (pyxem.generators.SubpixelrefinementGenerator method) M make_linear_plane() (pyxem.signals.BeamShift method) make_probe_navigation() (pyxem.signals.Diffraction2D method) make_signal() (pyxem.dummy_data.MakeTestData method) MakeTestData (class in pyxem.dummy_data) map_vectors() (pyxem.signals.LabeledDiffractionVectors2D method) mask_from_bkgd_pattern() (pyxem.generators.ReducedIntensityGenerator1D method) mask_inside_r() (pyxem.dummy_data.Ring method) mask_outside_r() (pyxem.dummy_data.Circle method) mask_reduced_intensity() (pyxem.generators.ReducedIntensityGenerator1D method) Medipix256x256Detector (class in pyxem.detectors) Medipix515x515Detector (class in pyxem.detectors) mgo_nanocrystals() (in module pyxem.data) module pyxem.components pyxem.data pyxem.detectors pyxem.dummy_data pyxem.generators pyxem.libraries pyxem.signals pyxem.utils N normalise_signal() (pyxem.signals.PairDistributionFunction1D method) num_columns (pyxem.signals.DiffractionVectors property) num_rows (pyxem.signals.DiffractionVectors property) O offsets (pyxem.signals.DiffractionVectors property) P PairDistributionFunction1D (class in pyxem.signals) PDFGenerator1D (class in pyxem.generators) pdnip_glass() (in module pyxem.data) peak_position_refinement_com() (pyxem.signals.Diffraction2D method) phase_retrieval() (pyxem.signals.DPCSignal2D method) pixel_calibration (pyxem.signals.DiffractionVectors property) pixel_vectors (pyxem.signals.DiffractionVectors property) plot() (pyxem.dummy_data.DiffractionTestDataset method) (pyxem.dummy_data.DiffractionTestImage method) (pyxem.signals.Diffraction2D method) plot_calibrated_data() (pyxem.generators.CalibrationGenerator method) plot_calibration_data() (pyxem.libraries.CalibrationDataLibrary method) plot_clustered() (pyxem.signals.LabeledDiffractionVectors2D method) plot_corrected_diffraction_pattern() (pyxem.generators.CalibrationGenerator method) plot_diffraction_vectors() (pyxem.signals.DiffractionVectors method) plot_diffraction_vectors_on_signal() (pyxem.signals.DiffractionVectors method) plot_integrated_intensity() (pyxem.signals.CommonDiffraction method) plot_symmetries() (pyxem.signals.Power2D method) plot_template_over_pattern() (in module pyxem.utils) polar_decomposition() (pyxem.signals.DisplacementGradientMap method) PolarDiffraction2D (class in pyxem.signals) PolarVectors (class in pyxem.signals) Power2D (class in pyxem.signals) ProfileIndexationGenerator (class in pyxem.generators) pyxem.components module pyxem.data module pyxem.detectors module pyxem.dummy_data module pyxem.generators module pyxem.libraries module pyxem.signals module pyxem.utils module R radial_average() (pyxem.signals.Diffraction2D method) radial_integration() (pyxem.signals.Diffraction2D method) ReducedIntensity1D (class in pyxem.signals) ReducedIntensityCorrectionComponent (class in pyxem.components) ReducedIntensityGenerator1D (class in pyxem.generators) reference_xc() (pyxem.generators.SubpixelrefinementGenerator method) refine_best_orientation() (pyxem.generators.VectorIndexationGenerator method) refine_n_best_orientations() (pyxem.generators.VectorIndexationGenerator method) Ring (class in pyxem.dummy_data) roll_time_axis() (pyxem.signals.InSituDiffraction2D method) rotate_beam_shifts() (pyxem.signals.DPCSignal2D method) rotate_data() (pyxem.signals.DPCSignal2D method) rotate_diffraction() (pyxem.signals.Diffraction2D method) rotate_strain_basis() (pyxem.signals.StrainMap method) S sample_with_g() (in module pyxem.data) scales (pyxem.signals.DiffractionVectors property) scan_calibration (pyxem.signals.ElectronDiffraction2D property) ScatteringFitComponentLobato (class in pyxem.components) ScatteringFitComponentXTables (class in pyxem.components) separate_learning_segments() (pyxem.signals.LearningSegment method) set_ai() (pyxem.signals.Diffraction2D method) (pyxem.signals.ElectronDiffraction2D method) set_centre_intensity() (pyxem.dummy_data.Disk method) set_diffraction_calibration() (pyxem.generators.ReducedIntensityGenerator1D method) (pyxem.signals.ElectronDiffraction1D method) (pyxem.signals.ElectronDiffraction2D method) set_diffraction_offset() (pyxem.generators.ReducedIntensityGenerator1D method) set_experimental_parameters() (pyxem.signals.ElectronDiffraction1D method) (pyxem.signals.ElectronDiffraction2D method) set_ROI_mesh() (pyxem.generators.VirtualImageGenerator method) set_s_cutoff() (pyxem.generators.ReducedIntensityGenerator1D method) set_scan_calibration() (pyxem.signals.ElectronDiffraction1D method) (pyxem.signals.ElectronDiffraction2D method) set_signal_zero() (pyxem.dummy_data.MakeTestData method) set_uniform_intensity() (pyxem.dummy_data.Circle method) shift_diffraction() (pyxem.signals.Diffraction2D method) sigma_clip() (pyxem.signals.Diffraction2D method) StrainMap (class in pyxem.signals) SubpixelrefinementGenerator (class in pyxem.generators) subtract_bkgd_pattern() (pyxem.generators.ReducedIntensityGenerator1D method) subtract_diffraction_background() (pyxem.signals.Diffraction2D method) T template_match() (pyxem.signals.Diffraction2D method) template_match_disk() (pyxem.signals.Diffraction2D method) template_match_ring() (pyxem.signals.Diffraction2D method) template_match_with_binary_image() (pyxem.signals.Diffraction2D method) TemplateIndexationGenerator (class in pyxem.generators) threshold_and_mask() (pyxem.signals.Diffraction2D method) tilt_boundary_data() (in module pyxem.data) to_ai() (pyxem.generators.CalibrationGenerator method) to_beamshift() (pyxem.signals.DPCSignal1D method) (pyxem.signals.DPCSignal2D method) to_cartesian() (pyxem.signals.PolarVectors method) to_dpcsignal() (pyxem.signals.BeamShift method) to_markers() (pyxem.signals.DiffractionVectors method) (pyxem.signals.LabeledDiffractionVectors2D method) (pyxem.signals.PolarVectors method) to_polar() (pyxem.signals.DiffractionVectors method) to_signal() (pyxem.dummy_data.MakeTestData method) twinned_nanowire() (in module pyxem.data) U unit (pyxem.signals.CommonDiffraction property) units (pyxem.signals.DiffractionVectors property) update_signal() (pyxem.dummy_data.MakeTestData method) V VarianceGenerator (class in pyxem.generators) VDFSegment (class in pyxem.signals) VectorIndexationGenerator (class in pyxem.generators) VectorMatchingResults (class in pyxem.signals) vectors (pyxem.signals.VirtualDarkFieldImage property) VirtualDarkFieldGenerator (class in pyxem.generators) VirtualDarkFieldImage (class in pyxem.signals) VirtualImageGenerator (class in pyxem.generators) Z zrnb_precipitate() (in module pyxem.data)